Operations after segmentation

[davramov]

• Puma pore analysis
• Fiber orientation
• Connected Component Labeling
• Make measurements off of the segmented image
• Aspect ratios of blobs
• 3D Volume Measurements -- every group
• Measure distribution of morphological features
• Percentage of the total volume that is occupied by X vs Y (Volume Fractions) -- every group
• Pore particle size distributions (FIJI boneJ)
• Volume analysis -- select two classes and get relative volume
• 2D cross-sectional area analysis (Dragonfly cross-hairs slice views) so you know you are looking at a perfectly perpendicular view to the cross section
• Surface mesh for 3D printing purposes and such
• Fluid analysis
• XY in xylem vessels -- plugging a piece of anatomy into an equation
• Instance counting, Instance selection, connected component
• Connectivity
• Morphology, porosity
• Export CSV file (?)
• 3D rendering
• Pick portions of a volume -- contacts between rocks that look different
• Flow measurement/fluid modeling -- numerical technique of 3D flow
• Particle identification