Search results

Question: peptidoform vs peptide

Status: Open.

#257 In CompOmics/ms2rescore;

· vvsbiocode opened on Apr 21, 2026

Responsible reporting of issues in the Percolator branch

Status: Open.

#256 In CompOmics/ms2rescore;

· vvsbiocode opened on Apr 18, 2026

Move spectrum parsing + matching + annotation into Rust as a single call

enhancement

Status: Open.

Task

#255 In CompOmics/ms2rescore;

· RalfG opened on Apr 16, 2026

·  

v3.3.0

Automated detection and transformation of rescoring features that should be in log space

enhancement

Status: Open.

Feature

#230 In CompOmics/ms2rescore;

· RalfG opened on Jul 10, 2025

results.mokapot.flashlfq.txt reports Retention time in hours, not minutes

enhancement

Status: Open.

Task

#227 In CompOmics/ms2rescore;

· rodvrees opened on Apr 30, 2025

Feature request: Avoid redundant MS2PIP predictions by caching identical peptides

enhancement

Status: Open.

Feature

#220 In CompOmics/ms2rescore;

· xudonggang opened on Apr 9, 2025

Add MS²Rescore version in written full config file

enhancement

Status: Open.

Feature

#202 In CompOmics/ms2rescore;

· RalfG opened on Oct 23, 2024

GUI: Allow spaces in input files

enhancement

GUIGraphical user interfaceGraphical user interface

Status: Open.

Feature

#201 In CompOmics/ms2rescore;

· RalfG opened on Oct 23, 2024

Implement better logging for PSM ID to spectrum ID matching

enhancement

Status: Open.

Feature

#158 In CompOmics/ms2rescore;

· RalfG opened on Jul 17, 2024

Validate that all modifications are resolvable

enhancement

Status: Open.

Feature

#155 In CompOmics/ms2rescore;

· RalfG opened on Jul 9, 2024

MS2PIPFeatureGenerator and DeepLCFeatureGenerator, provide a progress callback

enhancement

Status: Open.

Feature

#150 In CompOmics/ms2rescore;

· vrkosk opened on May 23, 2024

Add user control for whether models are downloaded automatically

enhancement

Status: Open.

Feature

#135 In CompOmics/ms2rescore;

· vrkosk opened on Mar 22, 2024