Skip to content

Bump psims from 0.1.30 to 1.3.4 - #513

Closed
dependabot[bot] wants to merge 1 commit into
devfrom
dependabot/pip/psims-1.3.4
Closed

Bump psims from 0.1.30 to 1.3.4#513
dependabot[bot] wants to merge 1 commit into
devfrom
dependabot/pip/psims-1.3.4

Conversation

@dependabot

@dependabot dependabot Bot commented on behalf of github Dec 13, 2024

Copy link
Copy Markdown
Contributor

Bumps psims from 0.1.30 to 1.3.4.

Changelog

Sourced from psims's changelog.

[v1.3.4] - 2024-08-25

Name Version Checksum
XLMOD.obo.gz release/2019-10-28 20422ebfdf25d53d9287eea52f1f925d
gno.obo.gz 2024-05-21 5f5db5832b92c6ef3e036e3e80da608f
go.obo.gz releases/2024-06-17 7fa7ade5e3e26eab3959a7e4bc89ad4f
pato.obo.gz releases/2024-03-28/pato.obo 1d9a7fb3423ef79f18f54eea352d09c8
psi-mod.obo.gz - 713e6dd17632d0388802f1b0e06800f0
psi-ms.obo.gz 4.1.172 e5defa3b8c03ed1f43a04fd7c8d1819e
unimod_tables.xml.gz - 50ca5b540cea270e91df3f555483d1e6
unit.obo.gz releases/2023-05-25 5a04e9d871730a1ee04764055e841785

Fixed

  • Make XSD value type parsing and formatting separate concepts and properly re-format date-like types

[v1.3.3] - 2024-01-25

Name Version Checksum
XLMOD.obo.gz release/2019-10-28 4e577044551d277e4bbd62753fa15e08
gno.obo.gz 2023-12-11 ec47a2eb0af631bca7a40d85a4832ab4
go.obo.gz releases/2024-01-17 7e6b9974184dda306e6e07631f1783af
pato.obo.gz releases/2023-05-18/pato.obo 8a14f0e3b3318c13d029d84d693a01e3
psi-mod.obo.gz - 713e6dd17632d0388802f1b0e06800f0
psi-ms.obo.gz 4.1.139 a7254eb76da9e38c85b9dad624c9f77e
unimod_tables.xml.gz - efc94f333458012a77203d09a64d7d38
unit.obo.gz releases/2023-05-25 5a04e9d871730a1ee04764055e841785

Changed

  1. The Unimod object now uses a thread-safe database session abstraction

[v1.3.2] - 2023-12-02

Name Version Checksum
XLMOD.obo.gz release/2019-10-28 4e577044551d277e4bbd62753fa15e08
gno.obo.gz 2023-11-09 078de92750ee4956b705684253a66f97
go.obo.gz releases/2023-11-15 1130d315870d82c1624f87b37305777b
pato.obo.gz releases/2023-05-18/pato.obo 8a14f0e3b3318c13d029d84d693a01e3
psi-mod.obo.gz - 713e6dd17632d0388802f1b0e06800f0
psi-ms.obo.gz 4.1.136 1d5aa08ea57762000d00a9300734a78c
unimod_tables.xml.gz - efc94f333458012a77203d09a64d7d38
unit.obo.gz releases/2023-05-25 5a04e9d871730a1ee04764055e841785

Added

  1. Add by_id method to Unimod for parity with pyteomics

[v1.3.1]

... (truncated)

Commits
  • 2d9f810 update changelog
  • 4615695 update controlled vocabularies
  • bca2ddd fix: split XSD type parsing and formatting into separate branches for datetim...
  • b2f5d86 Update changelog
  • 73b6541 version bump
  • 7f25165 update CVs
  • 594ebd1 Use scoped_session instead of a plain session for thread safety, hopefully.
  • 5a8e4c6 Version bump
  • 90a7444 Update changelog
  • 75a37c0 Fix compatability with pyteomics Unimod
  • Additional commits viewable in compare view

Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot show <dependency name> ignore conditions will show all of the ignore conditions of the specified dependency
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

@dependabot dependabot Bot added the dependencies Pull requests that update a dependency file label Dec 13, 2024
@dependabot
dependabot Bot force-pushed the dependabot/pip/psims-1.3.4 branch from 62a7955 to 403d5e3 Compare December 13, 2024 12:16
Bumps [psims](https://github.com/mobiusklein/psims) from 0.1.30 to 1.3.4.
- [Changelog](https://github.com/mobiusklein/psims/blob/master/CHANGELOG.md)
- [Commits](mobiusklein/psims@v0.1.30...v1.3.4)

---
updated-dependencies:
- dependency-name: psims
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot
dependabot Bot force-pushed the dependabot/pip/psims-1.3.4 branch from 403d5e3 to 876025b Compare December 13, 2024 12:17
@dependabot @github

dependabot Bot commented on behalf of github Jan 20, 2025

Copy link
Copy Markdown
Contributor Author

Superseded by #534.

@dependabot dependabot Bot closed this Jan 20, 2025
@dependabot
dependabot Bot deleted the dependabot/pip/psims-1.3.4 branch January 20, 2025 05:32
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

dependencies Pull requests that update a dependency file

Projects

None yet

Development

Successfully merging this pull request may close these issues.

0 participants