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Updates to build_crate_from_dataset.py #2

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Updates to build_crate_from_dataset.py #2

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14 changes: 9 additions & 5 deletions src/crate_builder_script/build_crate_from_dataset.py
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Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
import argparse
import logging
import os
from collections import defaultdict
from datetime import datetime, timezone
import logging
from pprint import pformat
from typing import Any, List

Expand Down Expand Up @@ -39,9 +39,7 @@ def fetch_entity_info(target_id: str) -> dict[str, Any]:
resp.raise_for_status()
ds_info = resp.json()
LOGGER.debug("TOP LEVEL:\n%s", pformat(ds_info, depth=1))
LOGGER.debug("INGEST METADATA:\n%s",
pformat(ds_info.get("ingest_metadata", {}))
)
LOGGER.debug("INGEST METADATA:\n%s", pformat(ds_info.get("ingest_metadata", {})))
LOGGER.debug("DIRECT ANCESTORS:\n%s", pformat(ds_info["direct_ancestors"], depth=2))
return ds_info

Expand Down Expand Up @@ -175,9 +173,15 @@ def main() -> None:
),
default=DEFAULT_OUTPUT_PATH,
)
parser.add_argument(
"--all_files",
action="store_true",
help="Include all files, not just data products and qa_qc files",
)
args = parser.parse_args()
target_id = args.target_id
outdir = args.outdir
include_all_files = args.all_files

ds_info = fetch_entity_info(target_id)

Expand Down Expand Up @@ -215,7 +219,7 @@ def main() -> None:
if "files" in ds_info:
# This is a derived dataset- include only data products and qa_qc files
for fl in ds_info["files"]:
if fl["is_data_product"] or fl["is_qa_qc"]:
if fl["is_data_product"] or fl["is_qa_qc"] or include_all_files:
LOGGER.debug(f"Adding {fl['rel_path']}")
crate.add_file(
asset_url(ds_info["uuid"], fl["rel_path"]), validate_url=True
Expand Down
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