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ruff format BioCRNpyler Test #46: Commit 56ba17c pushed by murrayrm
4m 37s pure_update-01Jan2026
pure_update-01Jan2026
4m 37s
ruff format BioCRNpyler Test #45: Commit 2f14b63 pushed by murrayrm
4m 33s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 33s
working notebook that replaces gfp_expression.py BioCRNpyler Test #44: Commit 8702c07 pushed by murrayrm
4m 16s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 16s
working notebook that replaces gfp_expression.py BioCRNpyler Test #43: Commit 868de77 pushed by murrayrm
4m 23s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 23s
ruff format BioCRNpyler Test #42: Commit 2f14b63 pushed by murrayrm
4m 30s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 30s
updated mechanisms and parameters for PURE BioCRNpyler Test #41: Commit 7a12846 pushed by murrayrm
4m 30s pure_update-01Jan2026
pure_update-01Jan2026
4m 30s
updated mechanisms and parameters for PURE BioCRNpyler Test #40: Commit 6eb27e6 pushed by murrayrm
4m 27s pure_update-01Jan2026
pure_update-01Jan2026
4m 27s
new plotting routines: plot_all_containing, plot_gene_expression_data BioCRNpyler Test #39: Commit 66f94a0 pushed by murrayrm
4m 45s pure_update-01Jan2026
pure_update-01Jan2026
4m 45s
create customizable PURE mixture BioCRNpyler Test #38: Commit 892bfc5 pushed by murrayrm
4m 19s pure_update-01Jan2026
pure_update-01Jan2026
4m 19s
convert parameter files to pure ASCII BioCRNpyler Test #37: Commit 8869b5d pushed by murrayrm
4m 18s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 18s
add default parameter_file for enzyme mechanisms BioCRNpyler Test #36: Commit 32b4302 pushed by murrayrm
4m 21s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 21s
add default parameter_file for enzyme mechanisms BioCRNpyler Test #35: Commit 087efbf pushed by murrayrm
4m 10s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 10s
add (default) parameter files for txtl mechanisms BioCRNpyler Test #34: Commit 469ec28 pushed by murrayrm
4m 21s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 21s
add documentation + code cleanup BioCRNpyler Test #33: Commit e18e71b pushed by murrayrm
4m 20s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 20s
Add missing PURE parameters + comments for TetR BioCRNpyler Test #32: Commit 876c33e pushed by murrayrm
4m 23s parameter_update-22Nov2025
parameter_update-22Nov2025
4m 23s
add preprocessing code + simplified docstrings BioCRNpyler Test #31: Commit 3405407 pushed by murrayrm
4m 20s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 20s
update docs/conf.py to avoid mathjax3 errors BioCRNpyler Test #30: Commit 0f96369 pushed by murrayrm
4m 22s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 22s
Merge pull request #1 from ayush9pandey/master BioCRNpyler Test #29: Commit ffd82ea pushed by murrayrm
4m 16s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 16s
clean up tutorials and remove sphinx formating/sectioning errors BioCRNpyler Test #28: Commit b2fb678 pushed by murrayrm
4m 19s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
4m 19s
add numpydoc to docs/requirements.txt BioCRNpyler Deploy #1: Commit 1a447ad pushed by murrayrm
6m 19s main
main
6m 19s
clean up tutorials and remove sphinx formating/sectioning errors BioCRNpyler Test #27: Commit f861989 pushed by murrayrm
6m 32s refmanual_updates-08Nov2025
refmanual_updates-08Nov2025
6m 32s
add information about direct simulation of CRN using bioscrape BioCRNpyler Test #26: Commit b41b527 pushed by murrayrm
4m 28s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 28s
additional small fixes to remove sphinx warning messages BioCRNpyler Test #25: Commit 89a7811 pushed by murrayrm
4m 22s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 22s
modify update_species(), update_reactions() summaries to reflect mech… BioCRNpyler Test #24: Commit 103ca98 pushed by murrayrm
4m 21s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 21s
undo non-docstring changes BioCRNpyler Test #23: Commit 0f0fd42 pushed by murrayrm
4m 24s docstring_updates-14Oct2025
docstring_updates-14Oct2025
4m 24s